Publication – Biomedical Computation and Drug Design

Judul publikasi	Volume/ Nomor/ Tahun	Nama Jurnal
PCSK9 in Cancer: Biological Mechanisms and Implications for Therapeutic Resistance Nuriza Ulul Azmi, Rezi Riadhi Syahdi, Meidi Utami Puteri, Arry Yanuar, Mitsuyasu Kato, Fadlina Chany Saputri	2026, 16(1), 67; https://doi.org/10.3390/biom16010067	Biomolecules
Evidence-based production framework for herbal medicine regulation in Indonesia Mohamad Kashuri, Taruna Ikrar, Sutriyo, Abdul Mun’im, Arry Yanuar	02 January 2026 Volume 16 – 2025 \| https://doi.org/10.3389/fphar.2025.1730273	Frontiers in Pharmacology
Development of a Universal Forward Primer and Species-Specific Reverse Primers for Porcine, Canine, and Murine Gene Detection using SYBR Green Multiplex Quantitative Polymerase Chain Reaction Hosea Imanuel, Ratika Rahmasari, Syifa Annisa, Muhareva Raekiansyah, Jekmal Malau, Catur Jatmika, Arry Yanuar, Irwandi Jaswir, Herman Suryadi, Eko Wahyu Putro, Juliann Nzembi Makau, Ken Watanabe	2026 Jan 5. doi: 10.2174/0113892010405875251110071558	Curr Pharm Biotechnol
Regulatory Reform and Policy Mapping in Indonesia’s Traditional Medicine, Health Supplement, and Cosmetic Sectors Mohamad Kashuri , Arry Yanuar	Vol. 8 No. 4 (2025):	Borneo Journal of Pharmacy
COSMO-RS prediction and validation of gingerol and shogaol extraction from Zingiber officinale var. rubrum using natural deep eutectic solvents Yulianita, Abdul Mun’im, Arry Yanuar, Fadlina Chany Saputri, Ratna Surya Alwi, Adelina Simamora & Gholamhossein Sodeifian	volume 16, Article number: 579 (2026)	Scientific Reports
Lipid Peroxidation Inhibition of Three Choline Chloride-Based NADES Extracts from Pluchea indica Leaves: Ex Vivo and In Silico Approaches. Ni Putu Ermi Hikmawanti, Tahyatul Bariroh, Agustin Yumita, Fadlina Chany Saputri, Arry Yanuar, Abdul Mun’im, Labibah Zikriyah, Aisyah Nur Fitriyani, Rini Mulyati, Lathifah As’ad Dzulnia Sekar	36(4), 2025, 695-708	Indonesian J Pharm
Studi In Silico dari Metabolit Invertebrata Laut Indonesia terhadap Protein ACE2 dan Spike Protein SARS-CoV-2 Varian Omicron Matheus Prayoga Claus, Masteria Yunovilsa Putra, Joko Tri Wibowo, Arry Yanuar	Vol. 8 No. 1 (2025)	Jurnal Farmasi & Sains Indonesia
Computational Qsar-Based Machine Learning Approach For Predicting Activity of SGLT2 Inhibitors Using The Knime Platform Adha Dastu Illahi, Gatot Fatwanto Hertono, Arry Yanuar*	17(1), pp. 328–333, 2025	International Journal of Applied Pharmaceutics,
Virtual Screening of The Zimbabwe Natural Product Database For Glucokinase Activators Ezekiel Makambwa, Masteria Yunovilsa Putra, Adha Dhastu Illahi, Muhammad Adil Khan, Arry Yanuar*	18(1), pp. 56–67, 2025	Asian Journal of Pharmaceutical and Clinical Research,
Synthesis of New Indazole Analogs of Curcumin as Antioxidant and Anti-inflammatory Candidates: An In Vitro Investigation Hariyanti, Hayun, Arry Yanuar, Azminah*	24(5), pp. 1556–1562, 2024	Indonesian Journal of Chemistry,
Decoding The Therapeutic Potential of Empon-Empon: A Bioinformatics Expedition Unraveling Mechanisms Against COVID-19 and Atherosclerosis Nur Hasanah, Fadlina Chany Saputri, Alhadi Bustamam, Vannajan Sanghiran Lee, Arry Yanuar	Vol 16, Issue 2, 2024	International Journal of Applied Pharmaceutics
Analysis of Gingerol and Shogaol Compounds From Red Ginger (Zingiber officinale Var. Rubrum) Extract Using Several Combinations of Natural Deep Eutectic Solvent Yulianita, Abdul Mun’im, Arry Yanuar, Fadlina Chani Saputri*	16(Special Issue 3), pp. 51–55	International Journal of Applied Pharmaceutics,
Determining antihypertensive herbal formulas based on molecular mechanisms and protein-compound interactions of selected Indonesian medicinal plants using a network pharmacological approach Lusi Agus Setiani, Fadlina Chany Saputri, Arry Yanuar, Abdul Mun’im	Volume: 14, Issue: 3, March, 2024 Published: Mar 05, 2024 DOI: 10.7324/JAPS.2024.152201	Journal of Applied Pharmaceutical Science
Insights into the anti-infective effects of Pluchea indica (L.) Less and its bioactive metabolites against various bacteria, fungi, viruses, and parasites Ni Putu Ermi Hikmawanti, Fadlina Chany Saputri, Arry Yanuar, Ibrahim Jantan, Ratih Asmana Ningrum, Abdul Mun’im	Volume 320, 10 February 2024, 117387 https://doi.org/10.1016/j.jep.2023.117387	Journal of Ethnopharmacology
Choline chloride-urea-based natural deep eutectic solvent for highly efficient extraction of polyphenolic antioxidants from Pluchea indica (L.) Less leaves Ni Putu Ermi Hikmawanti, Fadlina Chany Saputri, Arry Yanuar, Ibrahim Jantan, Ratih Asmana Ningrum, Ario Betha Juanssilfero, Abdul Mun’im	Volume 17, Issue 2, February 2024, 105537 https://doi.org/10.1016/j.arabjc.2023.105537	Arabian Journal of Chemistry
A computational approach to evaluate caffeoylquinic acids and flavonoids in Pluchea indica Less. leaves as potential anti-HIV agents Ni Putu Ermi Hikmawanti, Fadlina Chany Saputri, Arry Yanua, Ibrahim Jantan, Yeni, Abdul Mun’im	12 (4), 701-721, 2024 ISSN 0719-4250 https://jppres.com	Journal of Pharmacy & Pharmacognosy Research, DOI: https://doi.org/10.56499/jppres23.1896_12.4.701
Microscopical Evaluation and TLC Analysis of Pluchea indica (L.) Less: Leaf, Stem, and Root Ni Putu Ermi Hikmawanti, Fadlina Chany Saputri, Arry Yanuar, Ratih Asmana Ningrum, Abdul Mun’im, Hayati	Vol. 31 No. 1 (2024): January 2024 71-81	HAYATI Journal of Biosciences
Synthesis, molecular docking, and in vitro tests of the Mannich base derivatives of Benzimidazolvanilin as an anti-inflammatory Inas Priasti Siwi , Hayun , Arry Yanuar	Vol. 10 No. 4 (2024): April 0.29303/jppipa.v10i4.6199	Jurnal Penelitian Pendidikan IPA
THE POTENTIAL OF INDONESIAN MARINE NATURAL PRODUCT WITH DUAL TARGETING ACTIVITY THROUGH SARS-COV-2 3CLPRO AND PLPRO: AN IN SILICO STUDIES Cikal Fiarsi Nahir, Masteria Yunovilsa Putra, Joko Tri Wibowo, Vannajan Sanghiran Lee, Arry Yanuar	Vol 15 No 5, 2023	International Journal of Applied Pharmaceutics
In Silico Studies of Drug Discovery and Design Against COVID-19 Focusing on ACE2 and Spike Protein Virus Receptors: A Systematic Review Matheus prayoga claus, Masteria Yunovilsa Putra, Arry Yanuar	2(3): 73-78 (2023); https://doi.org/10.58920/sciphar02030073	Sciences of Pharmacy
Identification of potential Indonesian marine invertebrate bioactive compounds as TMPRSS2 and SARS-CoV-2 Omicron spike protein inhibitors through computational screening Haviani Rizka Nurcahyaningtyas, Alfrina Irene, Joko Tri Wibowo, Masteria Yunovilsa Putra, Arry Yanuar	Volume 16, Issue 9, September 2023, 104984	Arabian Journal of Chemistry
Traditional Indonesian Medication Combats COVID-19 Nur Hasanah, Fadlina Chany Saputri, Alhadi Bustamam, Arry Yanuar	Volume 2023	ICHSSE International Conference Health, Social Science & Engineering
Construction and analysis of protein-protein interaction to identify the molecular mechanism in hypertension Lusi Agus Setiani, Fadlina Chany Saputri, Arry Yanuar, Abdul Mun’im	2694, 040007 (2023)	AIP Conference Proceedings
The design and virtual screening of thiourea derivatives as a Sirtuin-1 inhibitor Ruswanto, Richa Mardianingrum, Ade Dwi Septian, Arry Yanuar	70(4), pp. 1335-1344, 2023 https://doi.org/10.3897/pharmacia.70.e108012	Pharmacia
Synthesis and in vitro Activity of Eugenyl Benzoate Derivatives as BCL-2 Inhibitor in Colorectal Cancer with QSAR and Molecular Docking Approach Fadilah, Retnosari Andrajati, Ade Arsianti, Rafika Indah Paramita, Linda Erlina, Khaerunissa Anbar Istiadi, Arry Yanuar	2023 Sep 1;24(9):2973-2981. doi: 10.31557/APJCP.2023.24.9.2973.	Asian Pac J Cancer Prev .
Secondary Metabolites from Marine-Derived Bacteria with Antibiotic and Antibioﬁlm Activities against Drug-Resistant Pathogens; Joko Tri Wibowo, Asep Bayu, Widya Dwi Aryati, Carla Fernandes, Arry Yanuar, Anake Kijjoa, Masteria Yunovilsa Putra*	2023, 21, 50. https://doi.org/10.3390/md21010050 publish : 12 January 2023	Marine Drugs
Virtual screening of Indonesian herbal compounds as COVID-19 supportive therapy: machine learning and pharmacophore modeling approaches; Linda Erlina, Rafika Indah Paramita, Wisnu Ananta Kusuma, Fadilah Fadilah, Aryo Tedjo, Irandi Putra Pratomo, Nabila Sekar Ramadhanti, Ahmad Kamal Nasution, Fadhlal Khaliq Surado, Aries Fitriawan, Khaerunissa Anbar Istiadi, Arry Yanuar*	volume 22, Article number: 207 (2022)	BMC Complementary Medicine and Therapies
New Decahydroacridine-1,8-Diones Derived From 3-Aminocyclohex-2-En-1-One: Synthesis, Characterization, Antioxidant, In-Vitro, and In-Silico Anti-Inflammatory Activity; I. P. Sari, H. Hariyanti, A. Yanuar, H. Hayun*	15(2), pp. 1241-1248, 2022	Rasayan Journal of Chemistry
Synthesis and in vitro cytotoxic activity of novel indazole analogues of curcumin against MCF-7, HeLa, WiDr, and vero cell lines; Hariyanti, Arry Yanuar, Kusmardi, Hayun*	12(4), pp. 179-184, 2022 DOI: 10.7324/JAPS.2022.120420	Journal of Applied Pharmaceutical Science
Evaluation quantitative structure-activity relationship (QSAR) using ensemble learning methods on acetylcholinesterase inhibitors for Alzheimer’s disease; Alhadi Bustamam, Mushliha -, Arry Yanuar, Prasnurzaki Anki, Adawiyah Ulfa*	2022,73	Communications in Mathematical Biology and Neuroscience
Development of Analysis and Validation of Human Insulin-Containing Matrices Using Reverse Phase-Liquid Chromatography; Christy Ambarsari, Herman Suryadi, Arry Yanuar*	VOL. 8 NO. 5 (2022): NOVEMBER 10.29303/jppipa.v8i5.2305	Jurnal Penelitian Pendidikan IPA
Dimensional Reduction of QSAR Features Using a Machine Learning Approach on the SARS-Cov-2 Inhibitor Database; Munaya Azizah, Arry Yanuar*, Firdayani	VOL. 8 NO. 6 (2022): DESEMBER	Jurnal Penelitian Pendidikan IPA
Virtual screening of dipeptidyl peptidase-4 inhibitors using quantitative structure–activity relationship-based artificial intelligence and molecular docking of hit compounds; Hermansyah, O., Bustamam, A., Yanuar, A*	95,107597, 2021	Computational Biology and Chemistry
Artificial intelligence paradigm for ligand‑based virtual screening on the drug discovery of type 2 diabetes mellitus; Alhadi Bustamam, Haris Hamzah, Nadya A. Husna, Sarah Syaroina, Nalendra Dwimantara, Arry Yanuar, Devvi Sarwinda*	volume 8, Article number: 74 (2021) Published: 26 May 2021 https://doi.org/10.1186/s40537‑021‑00465‑3	Journal of Big Data
The correlation between the level of 3-hydroxypropyl mercapturic acid, CYP2B6 polymorphisms, and hematuria occurrences after cyclophosphamide administration and its bioanalytical methods: A systematic review Harahap, Y., Nurahman, F., Purwanto, D.J., Yanuar, A.*	7(10),e08126, 2021	Heliyon
One-Dimensional Convolutional Neural Network Method as the Predicting Model for Interactions between Drug and Protein on Heterogeneous Network Iswahyuli; Alhadi Bustamam; Arry Yanuar; Wibowo Mangunwardoyo	10.1109/AIMS52415.2021.9466059 Date Added to IEEE Xplore: 30 June 2021	2021 International Conference on Artificial Intelligence and Mechatronics Systems (AIMS)
Model QSAR Classification Using Conv1D-LSTM of Dipeptidyl Peptidase-4 Inhibitors Adawiyah Ulfa; Alhadi Bustamam; Arry Yanuar; Rizka Amalia; Prasnurzaki Anki*	DOI: 10.1109/AIMS52415.2021.9466083 Date Added to IEEE Xplore: 30 June 2021	2021 International Conference on Artificial Intelligence and Mechatronics Systems (AIMS)
Comparison Accuracy of Multi-Layer Perceptron and DNN in QSAR Classification for Acetylcholinesterase Inhibitors Mushliha, Alhadi Bustamam; Arry Yanuar; Wibowo Mangunwardoyo; Prasnurzaki Anki; Rizka Amalia*	DOI: 10.1109/AIMS52415.2021.9466040 Date Added to IEEE Xplore: 30 June 2021	2021 International Conference on Artificial Intelligence and Mechatronics Systems (AIMS)
Ligand Based Pharmacophore Modeling, Virtual Screening, and Molecular Docking Studies of Asymmetrical Hexahydro-2H-Indazole Analogs of Curcumin (AIACs)to Discover Novel Estrogen Receptors Alpha (ERα) Inhibitor; Hariyanti,Kusmardi,Arry Yanuar,and Hayun*	2021, 21(1), 137-147 https://doi.org/10.22146/ijc.54745	Indones. J. Chem.,
The distance function approach on the MiniBatchKMeans algorithm for the DPP-4 inhibitors on the discovery of type 2 diabetes drugs Sarah Syarofina, Alhadi Bustamam, Arry Yanuar, Devvi Sarwinda, Herley S.Al-Ash, Abdul Hayat*	179, pp. 127-134. 2021	Procedia Computer Science
The Drug Design for Diabetes Mellitus type II using Rotation Forest Ensemble Classifier; Nadya Asanul Husna, Alhadi Bustamam, Arry Yanuar, Devvi Sarwinda*	179, pp. 161-168	Procedia Computer Science
(7e)-3-(4-methoxyphenyl)-7-[(4-methoxyphenyl)methylidene]-4,5,6,7-tetrahydro-3ah-indazole; Hariyanti, Arry Yanuar, Kusmardi Kusmardi, Hayun*	2020, 2020, M1162; doi:10.3390/M1162	Molbank
In silico analysis of sea cucumber bioactive compounds as anti-breast cancer mechanism using autodock vina S. Yasman, Arry Yanuar, Zeta Tamimi, S. Rezi Riadhi*	Volume 16, Issue 1, Winter 2020, Pages 1-8	Iranian Journal of Pharmaceutical Sciences
Classification analysis using support vector machine, decision tree, and neural network with principal component analysis to determine molecular structure relationship from its biological activity on dipeptidyl peptidase IV inhibitors; Haris Hamzah, Alhadi Bustamam, Arry Yanuar, Devvi Sarwinda*	2296, 020092(2020); https://doi.org/10.1063/5.0030748	AIP Conference Proceedings
Predicting the molecular structure relationship and the biological activity of DPP-4 inhibitor using deep neural network with catboost method as feature selection Haris Hamzah; Alhadi Bustamam; Arry Yanuar; Devvi Sarwinda*	2020, 9263204, pp. 101-108	2020 International Conference on Advanced Computer Science and Information Systems, ICACSIS
The comparison of machine learning methods for prediction study of type 2 diabetes mellitus’s drug design; Husna, N.A., Bustamam, A., Yanuar, A., Sarwinda, D., Hermansyah, O*	2264,030010	AIP Conference Proceedings
Cluster analysis in prediction of biological activity and molecular structure relationship of dipeptidyl peptidase-4 inhibitors for the type two diabetes mellitus treatment; Sarah Syarofina, Alhadi Bustamam, Arry Yanuar, Devvi Sarwinda,Oky Hermansyah*	Volume 2264, 22 September 2020, Article number 030006 Symposium on Biomathematics 2019, SYMOMATH 2019; Bali; Indonesia; 25 August 2019 through 28 August 2019; Code 163180	AIP Conference Proceedings
Andrographolide undergoes modification after illumination by blue laser in the presence of sodium bicarbonate; Isnaeni, Andrianopsyah Mas Jaya Putra,Muhammad Hanafi, Megawati, Andini Sundowo, Puspa Dewi Narrij Lotulung, Teni Ernawati, Siti Rahmah Kurnia, Fathimah Nurmajdina Marjani, Ernawati Simanjuntak, Arry Yanuar*, Chaidir Chaidir	2020, Vol. 59B, 1384-1387	Indian Journal of Chemistry – Section B,
Quantification of 3-Hydroxypropyl Mercapturic Acid In The Urine of Patients With Breast Cancer To Monitor Cyclophosphamide Toxicity Harahap, Yahdiana; Yanuar, Arry; Muhammad, Cyril; Melhan, Madeline; Purwanto, Denni Joko*	Volume 42, Issue 4, 1 August 2020, Pages 548-553 DOI: 10.1097/FTD.0000000000000737	Therapeutic Drug Monitoring
Application of The Machine and Deep Learning Methods For The Classification of Cannabinoid- and Cathinone-Derived Compounds Widya Dwi Aryati, Muhammad Siddiq Winarko, Gerry May Susanto, Arry Yanuar*	March 2020 Vol 12, Special Issue 1, 2020	International Journal of Applied Pharmaceutics ·
Dissolution enhancement of lansoprazole using cocrystallization; Silvia Surini, Dian Novitasari, Arry Yanuar*	Volume 12, Issue Special Issue 1, March 2020, Pages 202-206	International Journal of Applied Pharmaceutics,
Synthesis, Characterization, And In Vitro Antimalarial Activity of Dihydroxylation Derivatives of Triclosan; Wahyu Fitriana, Arry Yanuar,** Ade Arsianti, Hiroki Tanimoto, Kiyomi Kakiuchi*	March 2020 Vol 12, Special Issue 1, 2020	International Journal of Applied Pharmaceutics ·
Response Surface Methodology Applied To Oxalic Acid Hydrolysis Of Oil Palm Empty Fruit Bunch Biomass For D-Xylose Production; Herman Suryadi, Arry Yanuar, Harmita, Putri Winny Rachmadani*	March 2020 Vol 12, Special Issue 1, 2020	International Journal of Applied Pharmaceutics ·
In Silico Investigation of Echinodermata Secondary Metabolites as Human Immunodeficiency Virus Type 1 (HIV-1) Reverse Transcriptase Inhibitors; Nurrahma Nazwir, Arry Yanuar, Rezi Riadhi Syahdi*	March 2020 Vol 12, Special Issue 1, 2020	International Journal of Applied Pharmaceutics ·
In Silico Approach For Screening of The Indonesian Medicinal Plants Database To Discover Potential Dipeptidyl Peptidase-4 Inhibitors Aulia Farkhani, Rani Sauriasari, Arry Yanuar*	March 2020 Vol 12, Special Issue 1, 2020	International Journal of Applied Pharmaceutics ·
Synthesis of cinnamamide derivatives and their α-glucosidase inhibitory activities Teni Ernawati, Abdul Mun’im, Muhamad Hanafi, Arry Yanuar*	49(2)(2020): 315-322. Feb 2020 http://dx.doi.org/10.17576/jsm-2020-4902-09	Sains Malaysiana
Molecular modeling on the identification of potential Janus Kinase 3 (JAK3) inhibitors based on the Indonesian medicinal plant database Muhammad Arba, Sanang Nur Safitri, Andry-Nur Hidayat, Arry Yanuar,Muhammad Sulaiman Zubair,Asmiyenti Djaliasrin Djalil, Daryono Hadi Tjahjono*	52(3), pp. 276-285 Des 2020	Journal of Mathematical and Fundamental Sciences
Virtual screening of the indonesian medicinal plant and zinc databases for potential inhibitors of the rna-dependent rna polymerase (Rdrp) of 2019 novel coronavirus Muhammad Arba, Andry Nur-Hidayat, Ida Usman, Arry Yanuar, Setyanto Tri Wahyudi, Gilbert Fleischer, Dylan James Brunt, Chun Wu*	20(6), pp. 1430-1440 https://doi.org/10.22146/ijc.56120 https://jurnal.ugm.ac.id/ijc/article/view/56120/28442	Indonesian Journal of Chemistry
The search for peptide deformylase inhibitor from indonesian medicinal plant database: An in-silico investigation Arba, M, Pangan, A.R., Yanuar, A.*	Volume 10, Issue 2, 2020, Pages 5117-5121	Biointerface Research in Applied Chemistry;
Characterization of Kapok Pericarpium Microcrystalline Cellulose Produced of Enzymatic Hydrolysis Using Purified Cellulase From Termite (Macrotermes gilvus) Yulianita Pratiwi Indah Lestari, Herman Suryadi, Mirajunnisa, Wibowo Mangunwardoyo, Sutriyo, Arry Yanuar*	Vol 12, Issue 3, 2020. January	International Journal of Pharmacy and Pharmaceutical Sciences,
Insight on Estrogen Receptor Alpha Modulator from Indonesian Herbal Database: An in-silico analysis; Muhammad Arba, Nadhifatul Aslikah, Arfan, Ruslin, Arry Yanuar	Vol 17 No 02 Des 2020, 343-351	PHARMACY: Jurnal Farmasi Indonesia (Pharmaceutical Journal of Indonesia);
Epigenetic Diet to Modulate Immune Response against SARS-CoV-2; Andika, Risa Ahdyani, Linda Erlina, Azminah, Arry Yanuar	Vol 7 No 2, august 2020 114-122	PSR
Sosialisasi Implementasi Prototype Portal Manajemen Sumber Daya High Performance Computing (HPC): Simulasi Dinamika Molekular Heru Suhartanto, Arry Yanuar, Ari Wibisono, Yohanes Gultom	Vol.03 No.02 (2020)	Charity Jurnal Pengabdian Masyarakat

Judul publikasi

Volume/ Nomor/ Tahun

Nama Jurnal

PCSK9 in Cancer: Biological Mechanisms and Implications for Therapeutic Resistance

Nuriza Ulul Azmi, Rezi Riadhi Syahdi, Meidi Utami Puteri, Arry Yanuar, Mitsuyasu Kato, Fadlina Chany Saputri

2026, 16(1), 67; https://doi.org/10.3390/biom16010067

Biomolecules

Evidence-based production framework for herbal medicine regulation in Indonesia

Mohamad Kashuri, Taruna Ikrar, Sutriyo,

Abdul Mun’im, Arry Yanuar

02 January 2026

Volume 16 – 2025 | https://doi.org/10.3389/fphar.2025.1730273

Frontiers in Pharmacology

Development of a Universal Forward Primer and Species-Specific Reverse Primers for Porcine, Canine, and Murine Gene Detection using SYBR Green Multiplex Quantitative Polymerase Chain Reaction

Hosea Imanuel, Ratika Rahmasari, Syifa Annisa, Muhareva Raekiansyah, Jekmal Malau, Catur Jatmika, Arry Yanuar, Irwandi Jaswir, Herman Suryadi, Eko Wahyu Putro, Juliann Nzembi Makau, Ken Watanabe

2026 Jan 5. doi: 10.2174/0113892010405875251110071558

Curr Pharm Biotechnol

Regulatory Reform and Policy Mapping in Indonesia’s Traditional Medicine, Health Supplement, and Cosmetic Sectors

Mohamad Kashuri , Arry Yanuar

Vol. 8 No. 4 (2025):

Borneo Journal of Pharmacy

COSMO-RS prediction and validation of gingerol and shogaol extraction from Zingiber officinale var. rubrum using natural deep eutectic solvents

Yulianita, Abdul Mun’im, Arry Yanuar, Fadlina Chany Saputri, Ratna Surya Alwi, Adelina Simamora & Gholamhossein Sodeifian

volume 16, Article number: 579 (2026)

Scientific Reports

Lipid Peroxidation Inhibition of Three Choline Chloride-Based NADES Extracts from Pluchea indica Leaves: Ex Vivo and In Silico Approaches.

Ni Putu Ermi Hikmawanti, Tahyatul Bariroh, Agustin Yumita, Fadlina Chany Saputri, Arry Yanuar, Abdul Mun’im, Labibah Zikriyah, Aisyah Nur Fitriyani, Rini Mulyati, Lathifah As’ad Dzulnia Sekar

36(4), 2025, 695-708

Indonesian J Pharm

Studi In Silico dari Metabolit Invertebrata Laut Indonesia terhadap Protein ACE2 dan Spike Protein SARS-CoV-2 Varian Omicron

Matheus Prayoga Claus, Masteria Yunovilsa Putra, Joko Tri Wibowo, Arry Yanuar

Vol. 8 No. 1 (2025)

Jurnal Farmasi & Sains Indonesia

Computational Qsar-Based Machine Learning Approach For Predicting Activity of SGLT2 Inhibitors Using The Knime Platform

Adha Dastu Illahi, Gatot Fatwanto Hertono, Arry Yanuar*

17(1), pp. 328–333, 2025

International Journal of Applied Pharmaceutics,

Virtual Screening of The Zimbabwe Natural Product Database For Glucokinase Activators

Ezekiel Makambwa, Masteria Yunovilsa Putra, Adha Dhastu Illahi, Muhammad Adil Khan, Arry Yanuar*

18(1), pp. 56–67, 2025

Asian Journal of Pharmaceutical and Clinical Research,

Synthesis of New Indazole Analogs of Curcumin as Antioxidant and Anti-inflammatory Candidates: An In Vitro Investigation

Hariyanti*, Hayun, Arry Yanuar, Azminah

24(5), pp. 1556–1562, 2024

Indonesian Journal of Chemistry,

Decoding The Therapeutic Potential of Empon-Empon: A Bioinformatics Expedition Unraveling Mechanisms Against COVID-19 and Atherosclerosis

Nur Hasanah, Fadlina Chany Saputri, Alhadi Bustamam, Vannajan Sanghiran Lee,

Arry Yanuar

Vol 16, Issue 2, 2024

International Journal of Applied Pharmaceutics

Analysis of Gingerol and Shogaol Compounds From Red Ginger (Zingiber officinale Var. Rubrum) Extract Using Several Combinations of Natural Deep Eutectic Solvent

Yulianita, Abdul Mun’im*, Arry Yanuar, Fadlina Chani Saputri

16(Special Issue 3), pp. 51–55

International Journal of Applied Pharmaceutics,

Determining antihypertensive herbal formulas based on molecular mechanisms and protein-compound interactions of selected Indonesian medicinal plants using a network pharmacological approach

Lusi Agus Setiani, Fadlina Chany Saputri, Arry Yanuar, Abdul Mun’im

Volume: 14, Issue: 3, March, 2024

Published: Mar 05, 2024

DOI: 10.7324/JAPS.2024.152201

Journal of Applied Pharmaceutical Science

Insights into the anti-infective effects of Pluchea indica (L.) Less and its bioactive metabolites against various bacteria, fungi, viruses, and parasites

Ni Putu Ermi Hikmawanti, Fadlina Chany Saputri, Arry Yanuar, Ibrahim Jantan, Ratih Asmana Ningrum, Abdul Mun’im

Volume 320, 10 February 2024, 117387

https://doi.org/10.1016/j.jep.2023.117387

Journal of Ethnopharmacology

Choline chloride-urea-based natural deep eutectic solvent for highly efficient extraction of polyphenolic antioxidants from Pluchea indica (L.) Less leaves

Ni Putu Ermi Hikmawanti, Fadlina Chany Saputri, Arry Yanuar, Ibrahim Jantan, Ratih Asmana Ningrum, Ario Betha Juanssilfero, Abdul Mun’im

Volume 17, Issue 2, February 2024, 105537

https://doi.org/10.1016/j.arabjc.2023.105537

Arabian Journal of Chemistry

A computational approach to evaluate caffeoylquinic acids and flavonoids in Pluchea indica Less. leaves as potential anti-HIV agents

Ni Putu Ermi Hikmawanti, Fadlina Chany Saputri, Arry Yanua, Ibrahim Jantan, Yeni, Abdul Mun’im

12 (4), 701-721, 2024

ISSN 0719-4250

https://jppres.com

Journal of Pharmacy & Pharmacognosy Research, DOI: https://doi.org/10.56499/jppres23.1896_12.4.701

Microscopical Evaluation and TLC Analysis of Pluchea indica (L.) Less: Leaf, Stem, and Root

Ni Putu Ermi Hikmawanti, Fadlina Chany Saputri, Arry Yanuar, Ratih Asmana Ningrum, Abdul Mun’im, Hayati

Vol. 31 No. 1 (2024): January 2024

71-81

HAYATI Journal of Biosciences

Synthesis, molecular docking, and in vitro tests of the Mannich base derivatives of Benzimidazolvanilin as an anti-inflammatory

Inas Priasti Siwi , Hayun , Arry Yanuar

Vol. 10 No. 4 (2024): April

0.29303/jppipa.v10i4.6199

Jurnal Penelitian Pendidikan IPA

THE POTENTIAL OF INDONESIAN MARINE NATURAL PRODUCT WITH DUAL TARGETING ACTIVITY THROUGH SARS-COV-2 3CLPRO AND PLPRO: AN IN SILICO STUDIES

Cikal Fiarsi Nahir, Masteria Yunovilsa Putra, Joko Tri Wibowo, Vannajan Sanghiran Lee, Arry Yanuar

Vol 15 No 5, 2023

International Journal of Applied Pharmaceutics

In Silico Studies of Drug Discovery and Design Against COVID-19 Focusing on ACE2 and Spike Protein Virus Receptors: A Systematic Review

Matheus prayoga claus, Masteria Yunovilsa Putra, Arry Yanuar

2(3): 73-78 (2023); https://doi.org/10.58920/sciphar02030073

Sciences of Pharmacy

Identification of potential Indonesian marine invertebrate bioactive compounds as TMPRSS2 and SARS-CoV-2 Omicron spike protein inhibitors through computational screening

Haviani Rizka Nurcahyaningtyas, Alfrina Irene, Joko Tri Wibowo, Masteria Yunovilsa Putra, Arry Yanuar

Volume 16, Issue 9, September 2023, 104984

Arabian Journal of Chemistry

Traditional Indonesian Medication Combats

COVID-19

Nur Hasanah, Fadlina Chany Saputri, Alhadi Bustamam, Arry Yanuar

Volume 2023

ICHSSE

International Conference Health, Social Science & Engineering

Construction and analysis of protein-protein interaction to identify the molecular mechanism in hypertension

Lusi Agus Setiani, Fadlina Chany Saputri, Arry Yanuar, Abdul Mun’im

2694, 040007 (2023)

AIP Conference Proceedings

The design and virtual screening of thiourea derivatives as a Sirtuin-1 inhibitor

Ruswanto, Richa Mardianingrum, Ade Dwi Septian, Arry Yanuar

70(4), pp. 1335-1344, 2023

https://doi.org/10.3897/pharmacia.70.e108012

Pharmacia

Synthesis and in vitro Activity of Eugenyl Benzoate Derivatives as BCL-2 Inhibitor in Colorectal Cancer with QSAR and Molecular Docking Approach

Fadilah, Retnosari Andrajati, Ade Arsianti, Rafika Indah Paramita, Linda Erlina, Khaerunissa Anbar Istiadi, Arry Yanuar

2023 Sep 1;24(9):2973-2981. doi: 10.31557/APJCP.2023.24.9.2973.

Asian Pac J Cancer Prev

Secondary Metabolites from Marine-Derived Bacteria with Antibiotic and Antibioﬁlm Activities against Drug-Resistant Pathogens;

Joko Tri Wibowo, Asep Bayu, Widya Dwi Aryati, Carla Fernandes, Arry Yanuar, Anake Kijjoa, Masteria Yunovilsa Putra*

2023, 21, 50.

https://doi.org/10.3390/md21010050

publish : 12 January 2023

Marine Drugs

Virtual screening of Indonesian herbal compounds as COVID-19 supportive therapy: machine learning and pharmacophore modeling approaches;

Linda Erlina, Rafika Indah Paramita*, Wisnu Ananta Kusuma, Fadilah Fadilah, Aryo Tedjo, Irandi Putra Pratomo, Nabila Sekar Ramadhanti, Ahmad Kamal Nasution, Fadhlal Khaliq Surado, Aries Fitriawan, Khaerunissa Anbar Istiadi, Arry Yanuar

volume 22, Article number: 207 (2022)

BMC Complementary Medicine and Therapies

New Decahydroacridine-1,8-Diones Derived From 3-Aminocyclohex-2-En-1-One: Synthesis, Characterization, Antioxidant, In-Vitro, and In-Silico Anti-Inflammatory Activity;

I. P. Sari, H. Hariyanti, A. Yanuar, H. Hayun*

15(2), pp. 1241-1248, 2022

Rasayan Journal of Chemistry

Synthesis and in vitro cytotoxic activity of novel indazole analogues of curcumin against MCF-7, HeLa, WiDr, and vero cell lines;

Hariyanti, Arry Yanuar, Kusmardi, Hayun*

12(4), pp. 179-184, 2022

DOI: 10.7324/JAPS.2022.120420

Journal of Applied Pharmaceutical Science

Evaluation quantitative structure-activity relationship (QSAR) using ensemble learning methods on acetylcholinesterase inhibitors for Alzheimer’s disease;

Alhadi Bustamam*, Mushliha -, Arry Yanuar, Prasnurzaki Anki, Adawiyah Ulfa

2022,73

Communications in Mathematical Biology and Neuroscience

Development of Analysis and Validation of Human Insulin-Containing Matrices Using Reverse Phase-Liquid Chromatography;

Christy Ambarsari, Herman Suryadi*, Arry Yanuar

VOL. 8 NO. 5 (2022): NOVEMBER

10.29303/jppipa.v8i5.2305

Jurnal Penelitian Pendidikan IPA

Dimensional Reduction of QSAR Features Using a Machine Learning Approach on the SARS-Cov-2 Inhibitor Database;

Munaya Azizah, Arry Yanuar*, Firdayani

VOL. 8 NO. 6 (2022): DESEMBER

Jurnal Penelitian Pendidikan IPA

Virtual screening of dipeptidyl peptidase-4 inhibitors using quantitative structure–activity relationship-based artificial intelligence and molecular docking of hit compounds;

Hermansyah, O., Bustamam, A., Yanuar, A*

95,107597, 2021

Computational Biology and Chemistry

Artificial intelligence paradigm for ligand‑based virtual screening on the drug discovery of type 2 diabetes mellitus;

Alhadi Bustamam*, Haris Hamzah, Nadya A. Husna, Sarah Syaroina, Nalendra Dwimantara, Arry Yanuar, Devvi Sarwinda

volume 8, Article number: 74 (2021) Published: 26 May 2021

https://doi.org/10.1186/s40537‑021‑00465‑3

Journal of Big Data

The correlation between the level of 3-hydroxypropyl mercapturic acid, CYP2B6 polymorphisms, and hematuria occurrences after cyclophosphamide administration and its bioanalytical methods: A systematic review

Harahap, Y*., Nurahman, F., Purwanto, D.J., Yanuar, A.

7(10),e08126, 2021

Heliyon

One-Dimensional Convolutional Neural Network Method as the Predicting Model for Interactions between Drug and Protein on Heterogeneous Network

Iswahyuli; Alhadi Bustamam; Arry Yanuar; Wibowo Mangunwardoyo

10.1109/AIMS52415.2021.9466059

Date Added to IEEE Xplore: 30 June 2021

2021 International Conference on Artificial Intelligence and Mechatronics Systems (AIMS)

Model QSAR Classification Using Conv1D-LSTM of Dipeptidyl Peptidase-4 Inhibitors

Adawiyah Ulfa; Alhadi Bustamam*; Arry Yanuar; Rizka Amalia; Prasnurzaki Anki

DOI: 10.1109/AIMS52415.2021.9466083

Date Added to IEEE Xplore: 30 June 2021

2021 International Conference on Artificial Intelligence and Mechatronics Systems (AIMS)

Comparison Accuracy of Multi-Layer Perceptron and DNN in QSAR Classification for Acetylcholinesterase Inhibitors

Mushliha, Alhadi Bustamam*; Arry Yanuar; Wibowo Mangunwardoyo; Prasnurzaki Anki; Rizka Amalia

DOI: 10.1109/AIMS52415.2021.9466040

Date Added to IEEE Xplore: 30 June 2021

2021 International Conference on Artificial Intelligence and Mechatronics Systems (AIMS)

Ligand Based Pharmacophore Modeling, Virtual Screening, and Molecular Docking Studies of Asymmetrical Hexahydro-2H-Indazole Analogs of Curcumin (AIACs)to Discover Novel Estrogen Receptors Alpha (ERα) Inhibitor;

Hariyanti,Kusmardi,Arry Yanuar,and Hayun*

2021, 21(1), 137-147

https://doi.org/10.22146/ijc.54745

Indones. J. Chem.,

The distance function approach on the MiniBatchKMeans algorithm for the DPP-4 inhibitors on the discovery of type 2 diabetes drugs

Sarah Syarofina, Alhadi Bustamam*, Arry Yanuar, Devvi Sarwinda, Herley S.Al-Ash, Abdul Hayat

179, pp. 127-134. 2021

Procedia Computer Science

The Drug Design for Diabetes Mellitus type II using Rotation Forest Ensemble Classifier;

Nadya Asanul Husna, Alhadi Bustamam*, Arry Yanuar, Devvi Sarwinda

179, pp. 161-168

Procedia Computer Science

(7e)-3-(4-methoxyphenyl)-7-[(4-methoxyphenyl)methylidene]-4,5,6,7-tetrahydro-3ah-indazole;

Hariyanti, Arry Yanuar, Kusmardi Kusmardi, Hayun*

2020, 2020, M1162; doi:10.3390/M1162

Molbank

In silico analysis of sea cucumber bioactive compounds as anti-breast cancer mechanism using autodock vina

S. Yasman*, Arry Yanuar, Zeta Tamimi, S. Rezi Riadhi

Volume 16, Issue 1, Winter 2020, Pages 1-8

Iranian Journal of Pharmaceutical Sciences

Classification analysis using support vector machine, decision tree, and neural network with principal component analysis to determine molecular structure relationship from its biological activity on dipeptidyl peptidase IV inhibitors;

Haris Hamzah, Alhadi Bustamam*, Arry Yanuar, Devvi Sarwinda

2296, 020092(2020); https://doi.org/10.1063/5.0030748

AIP Conference Proceedings

Predicting the molecular structure relationship and the biological activity of DPP-4 inhibitor using deep neural network with catboost method as feature selection

Haris Hamzah; Alhadi Bustamam*; Arry Yanuar; Devvi Sarwinda

2020, 9263204, pp. 101-108

2020 International Conference on Advanced Computer Science and Information Systems, ICACSIS

The comparison of machine learning methods for prediction study of type 2 diabetes mellitus’s drug design;

Husna, N.A., Bustamam*, A., Yanuar, A., Sarwinda, D., Hermansyah, O

2264,030010

AIP Conference Proceedings

Cluster analysis in prediction of biological activity and molecular structure relationship of dipeptidyl peptidase-4 inhibitors for the type two diabetes mellitus treatment;

Sarah Syarofina, Alhadi Bustamam*, Arry Yanuar, Devvi Sarwinda,Oky Hermansyah

Volume 2264, 22 September 2020, Article number 030006

Symposium on Biomathematics 2019, SYMOMATH 2019; Bali; Indonesia; 25 August 2019 through 28 August 2019; Code 163180

AIP Conference Proceedings

Andrographolide undergoes modification after illumination by blue laser in the presence of

sodium bicarbonate;

Isnaeni, Andrianopsyah Mas Jaya Putra*,Muhammad Hanafi, Megawati, Andini Sundowo, Puspa Dewi Narrij Lotulung, Teni Ernawati, Siti Rahmah Kurnia, Fathimah Nurmajdina Marjani, Ernawati Simanjuntak, Arry Yanuar, Chaidir Chaidir

2020, Vol. 59B, 1384-1387

Indian Journal of Chemistry – Section B,

Quantification of 3-Hydroxypropyl Mercapturic Acid In The Urine of Patients With Breast Cancer To Monitor Cyclophosphamide Toxicity

Harahap, Yahdiana*; Yanuar, Arry; Muhammad, Cyril; Melhan, Madeline; Purwanto, Denni Joko

Volume 42, Issue 4, 1 August 2020, Pages 548-553

DOI: 10.1097/FTD.0000000000000737

Therapeutic Drug Monitoring

Application of The Machine and Deep Learning Methods For The Classification of Cannabinoid- and Cathinone-Derived Compounds

Widya Dwi Aryati, Muhammad Siddiq Winarko, Gerry May Susanto, Arry Yanuar*

March 2020

Vol 12, Special Issue 1, 2020

International Journal of Applied Pharmaceutics ·

Dissolution enhancement of lansoprazole using cocrystallization;

Silvia Surini*, Dian Novitasari, Arry Yanuar

Volume 12, Issue Special Issue 1, March 2020, Pages 202-206

International Journal of Applied Pharmaceutics,

Synthesis, Characterization, And In Vitro Antimalarial Activity of Dihydroxylation Derivatives of Triclosan;

Wahyu Fitriana, Arry Yanuar*, Ade Arsianti, Hiroki Tanimoto, Kiyomi Kakiuchi

March 2020

Vol 12, Special Issue 1, 2020

International Journal of Applied Pharmaceutics ·

Response Surface Methodology Applied To Oxalic Acid Hydrolysis Of Oil Palm Empty Fruit Bunch Biomass For D-Xylose Production;

Herman Suryadi*, Arry Yanuar, Harmita, Putri Winny Rachmadani

March 2020

Vol 12, Special Issue 1, 2020

International Journal of Applied Pharmaceutics ·

In Silico Investigation of Echinodermata Secondary Metabolites as Human Immunodeficiency Virus Type 1 (HIV-1) Reverse Transcriptase Inhibitors;

Nurrahma Nazwir, Arry Yanuar, Rezi Riadhi Syahdi*

March 2020

Vol 12, Special Issue 1, 2020

International Journal of Applied Pharmaceutics ·

In Silico Approach For Screening of The Indonesian Medicinal Plants Database To Discover Potential Dipeptidyl Peptidase-4 Inhibitors

Aulia Farkhani, Rani Sauriasari, Arry Yanuar*

March 2020

Vol 12, Special Issue 1, 2020

International Journal of Applied Pharmaceutics ·

Synthesis of cinnamamide derivatives and their α-glucosidase inhibitory activities

Teni Ernawati*, Abdul Mun’im, Muhamad Hanafi, Arry Yanuar

49(2)(2020): 315-322. Feb 2020

http://dx.doi.org/10.17576/jsm-2020-4902-09

Sains Malaysiana

Molecular modeling on the identification of potential Janus Kinase 3 (JAK3) inhibitors based on the Indonesian medicinal plant database

Muhammad Arba*, Sanang Nur Safitri, Andry-Nur Hidayat, Arry Yanuar,Muhammad Sulaiman Zubair,Asmiyenti Djaliasrin Djalil, Daryono Hadi Tjahjono

52(3), pp. 276-285 Des 2020

Journal of Mathematical and Fundamental Sciences

Virtual screening of the indonesian medicinal plant and zinc databases for potential inhibitors of the rna-dependent rna polymerase (Rdrp) of 2019 novel coronavirus

Muhammad Arba*, Andry Nur-Hidayat, Ida Usman, Arry Yanuar, Setyanto Tri Wahyudi, Gilbert Fleischer, Dylan James Brunt, Chun Wu

20(6), pp. 1430-1440

https://doi.org/10.22146/ijc.56120

https://jurnal.ugm.ac.id/ijc/article/view/56120/28442

Indonesian Journal of Chemistry

The search for peptide deformylase inhibitor from indonesian medicinal plant database: An in-silico investigation

Arba, M*, Pangan, A.R., Yanuar, A.

Volume 10, Issue 2, 2020, Pages 5117-5121

Biointerface Research in Applied Chemistry;

Characterization of Kapok Pericarpium Microcrystalline Cellulose Produced of Enzymatic Hydrolysis Using Purified Cellulase From Termite (Macrotermes gilvus)

Yulianita Pratiwi Indah Lestari, Herman Suryadi*, Mirajunnisa, Wibowo Mangunwardoyo, Sutriyo, Arry Yanuar

Vol 12, Issue 3, 2020. January

International Journal of Pharmacy and Pharmaceutical Sciences,

Insight on Estrogen Receptor Alpha Modulator from Indonesian Herbal Database: An in-silico analysis; Muhammad Arba, Nadhifatul Aslikah, Arfan, Ruslin, Arry Yanuar

Vol 17 No 02 Des 2020, 343-351

PHARMACY: Jurnal Farmasi Indonesia (Pharmaceutical Journal of Indonesia);

Epigenetic Diet to Modulate Immune Response against SARS-CoV-2;

Andika, Risa Ahdyani, Linda Erlina, Azminah, Arry Yanuar

Vol 7 No 2, august 2020

114-122

PSR

Sosialisasi Implementasi Prototype Portal Manajemen Sumber Daya High Performance Computing (HPC): Simulasi Dinamika Molekular Heru Suhartanto, Arry Yanuar, Ari Wibisono, Yohanes Gultom

Vol.03 No.02 (2020)

Charity Jurnal Pengabdian Masyarakat

Publication